PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR78891.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 167aa    MW: 18368.8 Da    PI: 10.9065
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR78891.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.16.1e-15701121055
         AP2  10 kkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +++g+WvAeIr+p++   r+r +lg+f tae+Aa+a+++a+  l+g
  RWR78891.1  70 RSWGKWVAEIREPRK---RTRKWLGTFSTAEDAARAYDRAAVMLYG 112
                 57**********954...5*********************987766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MDGAAVTSPI SEPSEDQNPS ENTLLLFSTP ISNTKHSPSP STSTKTTNRK CKGKGGPDNS  60
KFRYRESGQR SWGKWVAEIR EPRKRTRKWL GTFSTAEDAA RAYDRAAVML YGSRAQLTSS  120
RQLPSALSRL PRQRPLSGLC SPGPPASASH THLLLPLHHL LHLIHSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.13e-28ERF family protein