PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR78897.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 323aa    MW: 34510.7 Da    PI: 6.627
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR78897.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.76e-1863112255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+WvAeIr+p++   r+r +lg+f tae+Aa+a+++a+  l+g
  RWR78897.1  63 RYRGVRQRS-WGKWVAEIREPRK---RTRKWLGTFSTAEDAARAYDRAAVMLYG 112
                 59****999.**********954...5*********************987766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MDGAAVTSPI SEPSEDQNPS GEHSPPLSTP ISNTNTSPSP STSTNTTNRK CKGKGGPDNS  60
KFRYRGVRQR SWGKWVAEIR EPRKRTRKWL GTFSTAEDAA RAYDRAAVML YGSRAQLNLQ  120
PSAPQCSQSS SSTTASLRPL LPRPSGFGLT YASSSSSSSS SSSHPFMLDP SRSYPVQPSF  180
SSVAPGVLSN PAGIVHGPTE SDFQSSRNHQ FQYHQQHPYQ NLRQNIVVEA APSNINPNLS  240
FYDEITTLAG SVDSNLSLTV SSASAAACDS SSLVPPPDDL AHQQGGVGGG APPLSATAVW  300
PYVGEDYPAS SLWDDTDSFF FDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.18e-31ERF family protein