PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR78902.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family Trihelix
Protein Properties Length: 277aa    MW: 31652.9 Da    PI: 8.0663
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR78902.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix44.93e-1424107186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W+++ + aL+ea  ++   l+rg+l++++W+ev++++         +++ +qCk++++ l+k+yk +k+  +       st+p++++l+
  RWR78902.1  24 CWSEDATSALVEAWGDRYLLLNRGNLRQKDWKEVADAVnarvDGVRHRKTDVQCKNRIDTLKKKYKVEKAKTGP------STWPFYSRLD 107
                 7*************************************88444444567*******************999996......68*****998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MKVESQGGAH GGTPRPFSNG REDCWSEDAT SALVEAWGDR YLLLNRGNLR QKDWKEVADA  60
VNARVDGVRH RKTDVQCKNR IDTLKKKYKV EKAKTGPSTW PFYSRLDRLI GSAVKPIPAK  120
PSAAAFSHPN SFPAIFSGGG GFNSSGSSRG RNDEEDEEEE EDDLDYDGAR KHRRSGDLDP  180
RMVRELARAI VKFGEIYERI ESSKQQQMLE LERQRMEFTK ELEFQRMQMF MEAQLELEKI  240
KRSKYNSGTS GEILCHLYIF ALLLLLLLLL LLFVFLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05550.15e-63Trihelix family protein