PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR78932.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 414aa    MW: 46402.6 Da    PI: 4.7972
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR78932.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.95.8e-1969119155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr++  +g+WvAeIr+p   + r kr +lg+f ta +Aa a+++a+++++g
  RWR78932.1  69 CNYRGVRQRT-WGKWVAEIREP---N-RgKRLWLGTFPTALKAALAYDEAARAMYG 119
                 56*****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    
MSPEPERKRK SRSRRNGSNS IAETLAKWKV LNNQLDCSDD GDKRVRKIPA KGSKKGCMKG  60
KGGPENSHCN YRGVRQRTWG KWVAEIREPN RGKRLWLGTF PTALKAALAY DEAARAMYGS  120
CARLNLPQCG DQKDSSVATT SSTESTTTTS HQSDASGGED STTEVPKIKC EPEWERDEHE  180
QHLGCQAVPE AIAEVPKIKC KPEWQRDEHE QRLGGQAVPE ATAEVPKIKC KPEWERDEHE  240
QRVGLQAVQA PLSTLNTEEV PKIKCKPEWE RDEHEQRLGL QAVQAPLSTV NTEPNEGPVN  300
NVDLLQDLGG EEVFDVQELM RLMDEDPRNW SGQQMDLDYD LACNQDQLQC GSSSALSFQM  360
QNPDAKLLGS LYHMEQALPP IDMFDYGVCD EQLGFQAFDN WDLEGFHIGT PDNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11020.16e-29ERF family protein