PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR79120.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family FAR1
Protein Properties Length: 309aa    MW: 35204.6 Da    PI: 4.9352
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR79120.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1102.24.9e-32147238191
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                 kfYn+YA++vGFs+r+s   +skr+g+i++r+fvCskeg+r++++   ++k++r+ra tr gCka++ vkk+++g+w+++k+++eHnH+lap
  RWR79120.1 147 KFYNSYARRVGFSIRVSIYCRSKRDGSIISRRFVCSKEGFRRKKSGGsESKSKRPRAITREGCKAMILVKKQSSGVWVLSKFQKEHNHPLAP 238
                 6****************************************9998774678889***********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MDLGDDSGSE AGEGESDDML ENPLQNPQLG DEEDEDDDEE EEDELMGNPI RRSHLGDDSE  60
IMENLIRRSH FGEHGDLIGN YDGRQQRQYH VEEDADLMGN FDGRVRFDED GDAIGNSGGR  120
APGSSEDGED QEPFQGMQFE SEEAAKKFYN SYARRVGFSI RVSIYCRSKR DGSIISRRFV  180
CSKEGFRRKK SGGSESKSKR PRAITREGCK AMILVKKQSS GVWVLSKFQK EHNHPLAPPG  240
KVHCLRSHRG DKDKTIRELT HELERVNQKC AAYRSRLLMV LKDVEEHLTK KVEDVRQSIR  300
DIESEEQDH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.11e-53FAR1 family protein