PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR79176.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 250aa MW: 29263.1 Da PI: 8.5369

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR79176.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178.5	1.8e-55	8	137	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPtdeelv +yL+kkv+++k++l +vi+++d+y++ePwdL++ ++ e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v++ k RWR79176.1 8 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDIDLYRIEPWDLQEqcRIGYeEQSEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYD-K 104 69**************************.9***********953433332566**********************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 ++l+g++ktLvfykgrap+g+k+dW+mheyrle RWR79176.1 105 TRLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 137 99***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
METMESCVPP GFRFHPTDEE LVGYYLRKKV ASQKIDLDVI RDIDLYRIEP WDLQEQCRIG 60 YEEQSEWYFF SHKDKKYPTG TRTNRATMAG FWKATGRDKA VYDKTRLIGM RKTLVFYKGR 120 APNGQKSDWI MHEYRLESEE NGPPQEEGWV VCRAFKKRST NCQARNCEGW ESSYGYDEPG 180 GGLSSIIDSI DYLPRQAPTF LCKQEIESDN LNYLHSEQFV QQLPQLNSPS LTLKKRPSIV 240 SIGFSKRRRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	234	250	KKRPSIVSIGFSKRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18060.1	1e-141	NAC family protein