PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR79323.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ZF-HD
Protein Properties Length: 232aa    MW: 25701.7 Da    PI: 7.1111
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR79323.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.66.2e-333690358
  ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                 + rY+eClkNhA+s+GghavDGCgE+mp+ g+egt +alkCaACgCHRnFHR+e++
   RWR79323.1 36 ASRYRECLKNHAVSIGGHAVDGCGEYMPA-GQEGTLDALKCAACGCHRNFHRKESD 90
                 679*************************9.999********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MEFDDHDEQE EEVSEPLPMP ASCDALGNSA RLKKHASRYR ECLKNHAVSI GGHAVDGCGE  60
YMPAGQEGTL DALKCAACGC HRNFHRKESD GGGEVGFLHH HHHPHHHHFS SPYYRPPTAG  120
YIHMAAPHIR ASPALALPLS SGGGAVPSHE EQEDDVSNPS SGGGGTGKKR FRTRFTAEQK  180
EKMLAFAERL GWRIQKHDEE AVQQFCTEAC LERHVLKVWM HNNKHTLGKK PQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.15e-63ZF-HD family protein