PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR79368.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NAC
Protein Properties Length: 179aa    MW: 21048.8 Da    PI: 7.4241
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR79368.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM117.81e-3681342128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 
                 p G+rF Ptdeel+ +yL  k  g +l+  + ike+++y ++P +Lp+   +a  +e+yfF++r++ky +g+r++r++ +g+Wkat  ++ ++   +++
  RWR79368.1   8 PLGYRFCPTDEELI-HYLLLKNYGLELPS-NQIKECNVYAFNPDQLPQdFNYALGNELYFFTTRERKYFNGSRPSRTAGDGFWKATSVEQVIKGLdDTS 104
                 89************.99999999999999.77***************623334678********************************99998765778 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                  +g kk Lvfy +++++ +ktdW mheyr+
  RWR79368.1 105 IIGYKKKLVFYYKENNHNQKTDWQMHEYRI 134
                 8***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MMEDPYIPLG YRFCPTDEEL IHYLLLKNYG LELPSNQIKE CNVYAFNPDQ LPQDFNYALG  60
NELYFFTTRE RKYFNGSRPS RTAGDGFWKA TSVEQVIKGL DDTSIIGYKK KLVFYYKENN  120
HNQKTDWQMH EYRIEKTDGS AGRESMKMDG FVICRIYKRK TKASKSDALA VELFNSFDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.13e-39NAC family protein