PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR79393.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TCP

Protein Properties

Length: 178aa MW: 18196.3 Da PI: 10.4546

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR79393.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	93.4	4.7e-29	44	115	6	77
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..........ssssaseceaes 77 + ++++h kv+gR+ RvR++a caar+F+L++eLG+ + ++tieWLl+ a+p+i+++tg+ s RWR79393.1 44 SATKDRHIKVNGRGCRVRIPAVCAARIFQLTRELGHRSEGETIEWLLRHAEPSIIAATGSglvpspaaaaA----------S 115 569*********************************************************55544332220..........1 PP

Sequence ? help Back to Top
Protein Sequence Length: 178 aa Download sequence
MGSSSEPILN TGASDSAMIS SSPSSSSSKN TRILSKRNSS SSSSATKDRH IKVNGRGCRV 60 RIPAVCAARI FQLTRELGHR SEGETIEWLL RHAEPSIIAA TGSGLVPSPA AAAASSSAPP 120 PPPNDAVSAP APPFFVAVPG LNFNPAASVG LGFSGGSGFG YFPFTAPTMS EQQQQRGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	1e-29	TCP family protein