PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR79405.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 204aa    MW: 22751.4 Da    PI: 5.8146
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR79405.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2544.3e-1772122255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr ++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+ +++g
  RWR79405.1  72 SYRGVRKRP-WGKFAAEIRDSTR---HgIRVWLGTFDSAEAAALAYDQAAFAIRG 122
                 69*******.**********422...25************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MDSSSFFSQS PISQPSPESF SWDGHTFNQL PLPFNENDSE DMFLLEMLSV AASESDAPKE  60
TSSEAKQKKD KSYRGVRKRP WGKFAAEIRD STRHGIRVWL GTFDSAEAAA LAYDQAAFAI  120
RGSMAVLNFP VERVRESLRD LQSGDDGGSP VVALKRKHSM RRKSASGKKT GRAEVKKENV  180
MELEDLGVDY LEELLRSSEI ASPW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.16e-56ERF family protein