PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR79466.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 210aa    MW: 22501 Da    PI: 5.0512
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR79466.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.23.5e-172574255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr +k +g+Wv+eIr p++   r+r++lg+++ +e+Aa+a + a+ +l+g
  RWR79466.1 25 RYRGVRKRK-WGKWVSEIRLPNS---RQRIWLGSYDAPEKAARAFDTAAFCLRG 74
                59****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MVKPTAPRTS TSSSSSSSSW DREIRYRGVR KRKWGKWVSE IRLPNSRQRI WLGSYDAPEK  60
AARAFDTAAF CLRGRNAKLN FPENLPDIAG GRSLTPSEIQ AFASHFANEA LPPSEKESTI  120
ASSAPSGSES GVPLECDLNV DWLFLDPSSS AAAAAAAAAA GSGFGYFPAF GEFPGDGEIY  180
APPPTPLEVD NVGENNGGCC FSQVCNLWNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.19e-44ERF family protein