PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR79498.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 236aa MW: 27266.7 Da PI: 7.5061

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR79498.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.8	1e-17	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l ++++ +G ++W++++++ g++R++k+c++rw++yl RWR79498.1 16 KGAWTEEEDRKLSQCIQTHGEKRWRLVPSKAGLNRCGKSCRLRWLNYL 63 79********************************************97 PP
2	Myb_DNA-binding	47.1	5.4e-15	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+l ++ W++Ia +++ gRt++++k++w+++l RWR79498.1 69 RGNISDQEEDLIIRLHKLLENR-WSLIAGRLP-GRTDNEIKNYWNSHL 114 78999***************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MAPKNNNGSS KMHVNKGAWT EEEDRKLSQC IQTHGEKRWR LVPSKAGLNR CGKSCRLRWL 60 NYLRPNIKRG NISDQEEDLI IRLHKLLENR WSLIAGRLPG RTDNEIKNYW NSHLSKRVTN 120 DTAQKEKQGP EQSYNSKLPL KDNGEVSKWS PELKDNDFLA GEFKVEELFD FQEVERAGTL 180 LGPHEEKKKT AIERFDGSVV LPNEGQLNLD WVRELLEFDE EAGAKEWCMS LVSSFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	1e-52	MYB family protein