PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR79560.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family C2H2
Protein Properties Length: 250aa    MW: 27117.4 Da    PI: 6.7905
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR79560.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.00013104126123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C + F ++  L  H++ H
  RWR79560.1 104 FSCNYCQRKFVSSQALGGHQNAH 126
                 89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MNTPNSNFEA EVISEDEFDV SSQVASNISI QETSPHPHLG PTISSSAVFI NQHAPKTISL  60
DLTLKCSNGI HEFGSKKLVG FSQASSSESS NGPHPQSGAT TRVFSCNYCQ RKFVSSQALG  120
GHQNAHKRER TMAKQAMRTG VFSERYASMA SLPLYGSAGL SLGIKAHSLV HCGAMERPET  180
RGAARFDQGF KGMPIFVEDE EMDMFWPGSF RRVAAGSPSF EMVGRSNLNF VTLGPPQEED  240
LSAPDLTLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.13e-43C2H2 family protein