PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR79572.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

ARR-B

Protein Properties

Length: 547aa MW: 59533.6 Da PI: 6.5105

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR79572.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.9	2.3e-28	222	275	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl RWR79572.1 222 KPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQKFRL 275 79*****************.******************************8 PP
2	Myb_DNA-binding	40.6	6e-13	224	274	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qk++ RWR79572.1 224 RVVWSVELHQQFVSAVNQLGIDkaVPKRILELMNvPGLTRENVASHLQKFR 274 678**********************************************97 PP
3	Response_reg	73.3	9.3e-25	37	145	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+ + +++l+q+l k y +v+++ ++ al +l+ek+ +D+++ D+ mp+mdG++ll++ e +lp+i+++a g + + + ++ Ga RWR79572.1 37 VLVVDDDMACLKILEQMLVKCLY-SVTTCCRATIALSILREKKgsFDVVISDVYMPDMDGFKLLEHVGLEM-DLPVIMMSADGRTSAVMRGIRHGAC 131 89*******************.***********999999******************6644.8******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ +eel + RWR79572.1 132 DYLIKPVRIEELKN 145 *********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence
METVQKRPVS NLSMEKSYGM CKVDSVAADE FPAGLRVLVV DDDMACLKIL EQMLVKCLYS 60 VTTCCRATIA LSILREKKGS FDVVISDVYM PDMDGFKLLE HVGLEMDLPV IMMSADGRTS 120 AVMRGIRHGA CDYLIKPVRI EELKNIWQHV IRKKWNENKE LEHSGSAEDS ERRILVGDDA 180 EYTSSVNEGT DDTLKAQKKR RDTKGDEDED ELESDDPSTS KKPRVVWSVE LHQQFVSAVN 240 QLGIDKAVPK RILELMNVPG LTRENVASHL QKFRLYLKRL SGIAQHQGGS TSSFYGPAEP 300 NGSLGRLDIH ALAASGQIPP QTLAALHAEL LGRPTGSLVL QQMDQPIFLQ ASLQGGKCIP 360 VDRGVIFGRP LIKCQSNVSK PFPQPTISVE DISSGLATWP PNHLGAVVPA GNNGRLDTQN 420 GTMLMHALQQ QQQQPSVLPG STYAVNVQPS CLVVPSLSSN GFQSGRSTAP INQNSSFIGS 480 KAANKYSTVS SQSNNISLGG GQALDRDFKN VGVLNGYPIQ DVSISPLVSS SSVSAESCTD 540 WQVQNHP

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence

METVQKRPVS NLSMEKSYGM CKVDSVAADE FPAGLRVLVV DDDMACLKIL EQMLVKCLYS  60
VTTCCRATIA LSILREKKGS FDVVISDVYM PDMDGFKLLE HVGLEMDLPV IMMSADGRTS  120
AVMRGIRHGA CDYLIKPVRI EELKNIWQHV IRKKWNENKE LEHSGSAEDS ERRILVGDDA  180
EYTSSVNEGT DDTLKAQKKR RDTKGDEDED ELESDDPSTS KKPRVVWSVE LHQQFVSAVN  240
QLGIDKAVPK RILELMNVPG LTRENVASHL QKFRLYLKRL SGIAQHQGGS TSSFYGPAEP  300
NGSLGRLDIH ALAASGQIPP QTLAALHAEL LGRPTGSLVL QQMDQPIFLQ ASLQGGKCIP  360
VDRGVIFGRP LIKCQSNVSK PFPQPTISVE DISSGLATWP PNHLGAVVPA GNNGRLDTQN  420
GTMLMHALQQ QQQQPSVLPG STYAVNVQPS CLVVPSLSSN GFQSGRSTAP INQNSSFIGS  480
KAANKYSTVS SQSNNISLGG GQALDRDFKN VGVLNGYPIQ DVSISPLVSS SSVSAESCTD  540
WQVQNHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-125	ARR-B family protein