PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR79587.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 269aa MW: 30224.1 Da PI: 5.4206

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR79587.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	7.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++ + +G +W+++++ g+ R++k+c++rw +yl RWR79587.1 14 KGPWTPEEDKKLINFILSHGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	51	3.4e-16	70	111	4	47
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++ E++ +d+++ lG++ W++Ia++++ gRt++++k++w+++ RWR79587.1 70 LSESEEKMVIDLHAHLGNR-WSKIASHLP-GRTDNEIKNHWNTH 111 5899*************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MGRQPCCDKV GLKKGPWTPE EDKKLINFIL SHGQCCWRAV PKLAGLLRCG KSCRLRWTNY 60 LRPDLKRGLL SESEEKMVID LHAHLGNRWS KIASHLPGRT DNEIKNHWNT HIKKKLKKMG 120 IDPVTHMPLS PSTDLQLEQQ QQLSSSTVEF SDADENKENR TSTESPISDG LEEEKSITSE 180 LNAIEADALL SKSPAFCTDE VPLIQTHEIL APCASSSPSP SPSSSNSSLN PEEFRFSSME 240 WPEILSLGEL DDFIRWDSIC DEGIREISN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66230.1	6e-91	MYB family protein