PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR79622.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 95aa    MW: 11164.9 Da    PI: 10.0079
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR79622.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding482.8e-151057148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT++Ed ll + v ++G ++W+ Iar  g++R++k+c+ rw +yl
       RWR79622.1 10 RGSWTPDEDMLLTRSVFMFGQRRWDYIARASGLKRSGKSCRMRWMNYL 57
                     89********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    
MDLQDEKTRR GSWTPDEDML LTRSVFMFGQ RRWDYIARAS GLKRSGKSCR MRWMNYLHPD  60
LKHGPLSEAE EATVLQLHAR WGNKYVLVPM IGLLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.12e-33MYB family protein