PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR79646.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 240aa MW: 27859.4 Da PI: 8.8028

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR79646.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.7	1.8e-56	16	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdee++++yL kv ++++++ +++ evd++k+ePwdLpkk+k +ekewyfF++rdkky+tg r+nrat+sgyWkatgkdke+++ ++ l RWR79646.1 16 LPPGFRFHPTDEEIITHYLSSKVFNHNFTA-RAMGEVDLNKCEPWDLPKKAKMGEKEWYFFCQRDKKYPTGMRTNRATESGYWKATGKDKEIYRGRDCL 113 79***********************999.89***********99999**************************************9999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg+kktLvfy+grapkg+k++Wvmhe+rle RWR79646.1 114 VGMKKTLVFYEGRAPKGVKSNWVMHEFRLE 143 ***************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MEEVPMLREE NEGIDLPPGF RFHPTDEEII THYLSSKVFN HNFTARAMGE VDLNKCEPWD 60 LPKKAKMGEK EWYFFCQRDK KYPTGMRTNR ATESGYWKAT GKDKEIYRGR DCLVGMKKTL 120 VFYEGRAPKG VKSNWVMHEF RLEGKVSYYN LPKTSKNEWT VCKVFHKSNK PSSSFIEDID 180 DSYKRSTITS SRTSDGIHMS RISTGMENPE GNNSSPHPVS FPYISGYLHH NQEQFNSKLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.1	1e-100	NAC family protein