PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR79690.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB
Protein Properties Length: 303aa    MW: 34148.3 Da    PI: 7.139
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR79690.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.23.2e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lv +++++G+g+W++++   g+ R+ k+c++rw +yl
       RWR79690.1 14 KGPWTPEEDIILVSYIQEHGPGNWRSVPINTGLLRCSKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding43.38.3e-1467112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+ E+  ++++  +lG++ W++Ia++++  Rt++++k++w+++l
       RWR79690.1  67 RGNFTPHEEGMIIRLQGLLGNK-WAAIASYLP-QRTDNDIKNYWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MGRPPCCDKV GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PINTGLLRCS KSCRLRWTNY  60
LRPGIKRGNF TPHEEGMIIR LQGLLGNKWA AIASYLPQRT DNDIKNYWNT HLKKSLKKFQ  120
TVLDSSFISN SSIPQLHSKG WNGTSTPSSF RSCSTYASST ENISKLLEGW MRDSSKPNIT  180
LKKAQEEEQQ SNEKKIAFAA ENSQRHHPKA EEVCDLISNE ELEQLFTFEN VSKMAWEKAS  240
TNSTPQGSLS SLTDSLNSVA ETKENSENRP PYSFHEKWIL DEAAAQVEDL MDLSLDCSSG  300
SVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.16e-97MYB family protein