PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR79731.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 202aa    MW: 22747.5 Da    PI: 7.8548
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR79731.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.7e-181058355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                y+GVr+++ +g+WvAeIr p +   r r++lg+++++e Aa a+++a+ kl+g
  RWR79731.1 10 YRGVRQRH-WGKWVAEIRLPHN---RMRVWLGTYDSPEAAAYAYDRAAYKLRG 58
                9******9.**********733...4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MGKKRKKNLY RGVRQRHWGK WVAEIRLPHN RMRVWLGTYD SPEAAAYAYD RAAYKLRGDY  60
ARLNFPNQRE GIQFCDRPTL IALQSAVDAK LQAICDRIKR ENAKKELKKH DGKEEKETPS  120
PPSSSSMSSS VVVGNEWSSE TLQQSSPYGS NEGWCNGGES TPSILSEEDQ MNVVQLEFDG  180
GCCSLASLPS FDAELIWEVL AS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
137KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.18e-40ERF family protein