PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR79842.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 243aa    MW: 27140.8 Da    PI: 7.6252
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR79842.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.61.2e-1479129154
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++++hn++Er RR+++Ns +++Lr+llP +   ++kKls  +++ ++ +YI +L
  RWR79842.1  79 KKMSHNANERDRRKKLNSLYSTLRSLLPVS---DQKKLSIPATVSLVLKYIPEL 129
                 789**************************9...9*****************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MLALSPSSWF PTFGWPSDDN IGQDQNRWAE DYDHPFIKYK REIDGLDSCF RISSPQLMGA  60
IDSPKISPAT SEGISPNLKK MSHNANERDR RKKLNSLYST LRSLLPVSDQ KKLSIPATVS  120
LVLKYIPELK KQVERLTRRK EEILSQISSQ SDLTHLINGR KDANGPLGSS SFPSISTTQV  180
DEREVVVQIC TSDVQSIALS EIVSKLEEES LQIQNASSFT AAGGKVFHNL HLQVPFLFIQ  240
IGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.19e-44bHLH family protein