PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR80001.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 185aa MW: 21015.3 Da PI: 9.9095

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR80001.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.1	1.5e-32	106	164	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk++++prsYYrCt ++C+vkk+v+r ++d+ vv++tYeg+H+h+ RWR80001.1 106 LDDGYRWRKYGQKAVKNNKYPRSYYRCTNQDCNVKKQVQRLSKDEGVVVTTYEGTHTHP 164 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence
MQGCHLPISS SSSSSSSSSF ASSYLSPFPS NMAASHILPN FQENTSRPLG FKEEVDVPRS 60 SGDNIPRIER TFAGSGNEAK TGKKKVERKD RKPRFAFQTR SQVDILDDGY RWRKYGQKAV 120 KNNKYPRSYY RCTNQDCNVK KQVQRLSKDE GVVVTTYEGT HTHPIERSTD NFEHILSQMQ 180 VYSGY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	8e-55	WRKY family protein