PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR80034.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 252aa MW: 28393.6 Da PI: 4.8688

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR80034.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	141	7.3e-44	4	136	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 lppGfrF Pt++elv +yL++k+egk+ le+vi+ vdiy+++Pw+Lp+ ++++++++w+fFs+r++++a+g r+nr+t sgyWkatg+ +++s+ RWR80034.1 4 LPPGFRFFPTEDELVGFYLRHKLEGKREGLERVIPVVDIYSLDPWELPRisgELSTGDEQWFFFSPRQEREARGGRPNRITPSGYWKATGTPSNIFSSt 102 79***********************999999**********955667778999**********************************85 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyr 127 + ++glk+t+vfy+g+ap+g+kt+W ++ey+ RWR80034.1 103 stANFKIGLKRTMVFYEGKAPTGNKTKWKVNEYK 136 444445*************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MSSLPPGFRF FPTEDELVGF YLRHKLEGKR EGLERVIPVV DIYSLDPWEL PRISGELSTG 60 DEQWFFFSPR QEREARGGRP NRITPSGYWK ATGTPSNIFS STSTANFKIG LKRTMVFYEG 120 KAPTGNKTKW KVNEYKALEE ARTSSDAPKV RHEMSLCRVY VTSGTLRSFD RRPLVSGRGE 180 VVVREESSGA ITDGGFYNNE GTSSSCFAEV SQESTSMEEQ GSRMNPSLAE DAETELNTMD 240 DLEALWSSFC WD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	4e-72	NAC family protein