PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR80039.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

FAR1

Protein Properties

Length: 782aa MW: 89432.1 Da PI: 6.5652

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR80039.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	91.1	1.5e-28	110	194	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fYn YA++vGFs+r s ++skr+geit+r+fvC ++g+++++++ +++r+++r gCka ++vk++++g+w+v + ++eHnH+l+ RWR80039.1 110 FYNGYARRVGFSIRASDFYRSKRTGEITSRRFVCARQGFHKRKDTL----KHPRTSNREGCKAFMHVKRRDSGRWVVVRAVKEHNHDLM 194 9**************************************99888....99*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 782 aa Download sequence
MEERAKGEDK GLELRKQEES RFEGKRSKAK QGEEKKKKQD LPLLPDVGEE CNLLAGSCPP 60 SEDDAEEFYM VKEELGVDAD EQQSVMVQGV TSIQLCVGME FESEEAARIF YNGYARRVGF 120 SIRASDFYRS KRTGEITSRR FVCARQGFHK RKDTLKHPRT SNREGCKAFM HVKRRDSGRW 180 VVVRAVKEHN HDLMSVRKLH SLGSRRHLYD AAKSLIVSFE GVEEASSHSS PLPREIFSGT 240 NRNYGSYIGS DPQRNLGRDF QTLLEYFKTK QTESPAFFYA IQVDEGQCMR NVFWVDARSR 300 MAYKYFHDVV TFGMEFKRNL SELSFVSFTG LNHHEQTTFF GCALLSDESE SSFVWLFNTW 360 LAAMSGCHPK ALVTIQDESI LAAVAQVLPK TRHCLDKWDI LCEVADKLAH VHKAHHSFEG 420 ELHKCINMNG TVEEFESSWE FLLNRYNLKD NDLLRSLYDV RWQWVPVYLR DTFFAGMSMV 480 EQSGSPDSFF VGYVNAQATL QEFIGQYEKC LDTQYEKEVE ADFETIHTKR FLKTASPIEK 540 QAAHIYTKEI FTRFQEELFE TCAYTAHRYE EDGALSMYRV ARFGEDHEAC TVTFDTSKLE 600 ASCSCRMFEF SGILCRHLLT VFRLANILSL PSHCFLKRWT RNAKSGTTLD DQATDLEGNC 660 CSSLTGLTLR YNNLCQEAIK LAEEGAVSMG IYDVAVHALR EALDKVLAAK NIVVNAMHDD 720 EDSLFCGSFR EDDVSEESRA ENVAEHTISC VPHLSKAKGR PLTSKLKPGR EKKSQKLRMC 780 NI

Sequence ? help Back to Top

Protein Sequence Length: 782 aa Download sequence

MEERAKGEDK GLELRKQEES RFEGKRSKAK QGEEKKKKQD LPLLPDVGEE CNLLAGSCPP  60
SEDDAEEFYM VKEELGVDAD EQQSVMVQGV TSIQLCVGME FESEEAARIF YNGYARRVGF  120
SIRASDFYRS KRTGEITSRR FVCARQGFHK RKDTLKHPRT SNREGCKAFM HVKRRDSGRW  180
VVVRAVKEHN HDLMSVRKLH SLGSRRHLYD AAKSLIVSFE GVEEASSHSS PLPREIFSGT  240
NRNYGSYIGS DPQRNLGRDF QTLLEYFKTK QTESPAFFYA IQVDEGQCMR NVFWVDARSR  300
MAYKYFHDVV TFGMEFKRNL SELSFVSFTG LNHHEQTTFF GCALLSDESE SSFVWLFNTW  360
LAAMSGCHPK ALVTIQDESI LAAVAQVLPK TRHCLDKWDI LCEVADKLAH VHKAHHSFEG  420
ELHKCINMNG TVEEFESSWE FLLNRYNLKD NDLLRSLYDV RWQWVPVYLR DTFFAGMSMV  480
EQSGSPDSFF VGYVNAQATL QEFIGQYEKC LDTQYEKEVE ADFETIHTKR FLKTASPIEK  540
QAAHIYTKEI FTRFQEELFE TCAYTAHRYE EDGALSMYRV ARFGEDHEAC TVTFDTSKLE  600
ASCSCRMFEF SGILCRHLLT VFRLANILSL PSHCFLKRWT RNAKSGTTLD DQATDLEGNC  660
CSSLTGLTLR YNNLCQEAIK LAEEGAVSMG IYDVAVHALR EALDKVLAAK NIVVNAMHDD  720
EDSLFCGSFR EDDVSEESRA ENVAEHTISC VPHLSKAKGR PLTSKLKPGR EKKSQKLRMC  780
NI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein