PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR80131.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 206aa    MW: 22453.3 Da    PI: 10.2078
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR80131.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31.1e-193381355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                ++GVr ++ +gr++AeIrdp     + +r++lg+f+tae+Aa+a+++a+++l+g
  RWR80131.1 33 FRGVRKRP-WGRFAAEIRDPI----KkTRIWLGTFDTAEDAARAYDNAARNLRG 81
                8*******.**********72....35*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MGRRGKGAAA APPTATRIPP PAIRSDRPKE IRFRGVRKRP WGRFAAEIRD PIKKTRIWLG  60
TFDTAEDAAR AYDNAARNLR GPKAKTNFQI YPSFSPVLPP IPFDPEFPMQ QWPTSSSLSS  120
TVESSSGPRV SATAVTLDPS RLRHHPPPFP GDCRSDCDSS SSVVDENDDD MASSGVRKTL  180
PFDLNVPAAV ESKAGADDLQ TTALRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53170.11e-23ERF family protein