PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR80209.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family WRKY
Protein Properties Length: 171aa    MW: 19046.6 Da    PI: 6.6668
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR80209.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY30.47.9e-10116136121
                 ---SS-EEEEEEE--TT-SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefp 21 
                 ldDgy+WrKYGqK vk+s +p
  RWR80209.1 116 LDDGYRWRKYGQKAVKNSIYP 136
                 59****************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MEGEGAPLTP NIPCFFPPPL EEQSPQHHLS CLGQPQQSHL DCSSAADIID WVALLSGQVG  60
FLDQKPNPES DLETILVRGS EQGMGATSKE KGRMSGTKKA SRPRFAFQTR SADDILDDGY  120
RWRKYGQKAV KNSIYPSIVV TTYEGIHNHP CEKLMETLSP LLKQMQFLAR F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46130.11e-35WRKY family protein