PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR80233.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 91aa    MW: 10982.5 Da    PI: 9.5746
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR80233.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.81e-073069445
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     +T +E++l+++  ++ G + W++Ia +++ gR + ++  +w 
       RWR80233.1 30 MTDQEEDLIYRMYRLVGDR-WALIAGRIP-GRKPVEIERFWI 69
                     79***************99.*********.********9995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
MDNKRRRKEA KASTNDSEEV SSIEWELIKM TDQEEDLIYR MYRLVGDRWA LIAGRIPGRK  60
PVEIERFWIM RHREGFEEKR KSSNASNSFL Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53200.15e-41MYB_related family protein