PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR80248.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 300aa    MW: 33883 Da    PI: 4.7384
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR80248.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.13.4e-21103153155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++++GVr+++ +g+W+AeIrdps    r +r++lg+++taeeAak +++a+ +l+g
  RWR80248.1 103 KKFRGVRQRP-WGKWAAEIRDPS----RrARVWLGTYDTAEEAAKVYDNAAIQLRG 153
                 59********.**********84....34*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MESNIFSPPM KFTEHRNLTT KAVIKPLAKQ RGPKVVRISV TDAYATDSSG DDEELLFPRH  60
RVKRYVNEIK IEDPIIKISK RSRSRKKNKA VEETLPATSL VEKKFRGVRQ RPWGKWAAEI  120
RDPSRRARVW LGTYDTAEEA AKVYDNAAIQ LRGPDALTNF ARSDPDPNVS TEDSIDECRM  180
NLSSPTSVLR FGSSSTSVEE IESQIREKQI EKTTTPMPRT TCSDLGEFLT EETSFLDNFG  240
DFEFQNPDLL LENSILNDGG FDDLFLDGKD GFGSSQPPWQ LDDSFPEIGD LFALDPLITL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18085KRSRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.16e-54ERF family protein