PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR80295.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family Nin-like
Protein Properties Length: 211aa    MW: 24222.7 Da    PI: 8.395
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR80295.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK81.96.2e-26102150452
      RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 +i+++++++yF+lpi++AAkeL v+lTvLK++CR++GI RWP+Rk++sl
  RWR80295.1 102 SIEFDEIKRYFYLPITKAAKELRVGLTVLKKRCRELGITRWPSRKMNSL 150
                 699********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MYAHKMCVEL PPFPPLYDFQ DSEVDFLKWC NSFPSLKEHD GCIADAIPLN FATDSSHGNE  60
GIRICDESGE VGKDSVSSGS VCRDEEGRRN GQCNGRLRSS ISIEFDEIKR YFYLPITKAA  120
KELRVGLTVL KKRCRELGIT RWPSRKMNSL RSLIHNVKRI GDNGDTIHRL EQLKRLLERE  180
PEIELNEETK KLRQACFKAN YKRRVMEATA A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53040.11e-29Nin-like family protein