PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR80454.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 252aa MW: 29087 Da PI: 8.6433

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR80454.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.1	2.1e-18	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll+d+v ++G g+W+++a g++R +k+c++rw +yl RWR80454.1 17 KGPWTAEEDKLLIDYVSMHGEGRWNSVAGISGLKRNGKSCRLRWVNYL 64 79****************************9***********97 PP
2	Myb_DNA-binding	56.6	6e-18	70	114	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g T++E+++++d++++lG++ W+tIar ++ gRt++++k++w+++ RWR80454.1 70 KGQITPDEEKIIIDLHARLGNR-WSTIARSLP-GRTDNEIKNYWRTH 114 5778****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MTSAAMNWGV VKEGWRKGPW TAEEDKLLID YVSMHGEGRW NSVAGISGLK RNGKSCRLRW 60 VNYLKPDLKK GQITPDEEKI IIDLHARLGN RWSTIARSLP GRTDNEIKNY WRTHFKKNEK 120 QSNKSAKEKA RALRHQQQQQ QQQLQQVHHQ LHQQEDVDMK RIVSQLEEGD YKLSSVAQGQ 180 PEMVFMYPMM ADEPCVSSTL LEAMVTEDSL WGGLWNWDGI HANLDHMSAT SKAVEKIEMS 240 SFYPGYFNQS LI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24310.1	3e-71	MYB family protein