PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR80617.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 335aa    MW: 36642.3 Da    PI: 9.0172
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR80617.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding431.1e-1387131347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++++ ++lG g+W+ I+r++  +Rt+ q+ s+ qky
       RWR80617.1  87 PWTKEEHRTFLEGLEKLGRGDWRGISRKFVMTRTPTQVASHAQKY 131
                      8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MAREMNRKCS HCGKNGHNLR TCSDKGLKLF GVRILSPDEE EEVMRKSASM GNLASLASSE  60
QIDHGYLSDG LLHSSGRGKR ERKRGVPWTK EEHRTFLEGL EKLGRGDWRG ISRKFVMTRT  120
PTQVASHAQK YFLRHTMFNN KKRRSSLFDM AINDAAPTSD TGPALSQMRT NESPEVSNLR  180
HQDNYVVGNT ASIVTQTPVH SIQISPTSPP IEACGEALNV NGVSYMSGLA AENQTKDGTF  240
QISQTLSFVP APGSSYFSDI IPLKPHDGLP CSPNFLRLSL NPSPHSDSYC PSQATMELPA  300
MGNSDLELSI APPRQLNSTR LSSGASTLSG AIRVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.13e-48MYB_related family protein