PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR80618.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family C3H
Protein Properties Length: 222aa    MW: 25716.9 Da    PI: 6.5008
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR80618.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH28.33.1e-0982103426
                 ---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                 + C+ f+r G C++Gd+C FaHg
  RWR80618.1  82 VTCPEFRR-GGCPRGDSCEFAHG 103
                 68******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MLKGLSQSLF EISKPRFSEI KPTGCFSNSS ETVYETDEFR MYTFKIKWCN KTRTHDWTEC  60
PYAHRGEKAR RRDPRKFNYY GVTCPEFRRG GCPRGDSCEF AHGVFEFWLH PERYRTRACT  120
AGQYCRRKVC FFAHTPEQLR IGSEFMQDTA YHRIYLDGLD GGGRFTSTAS PENEFSFMGD  180
GDFVVSMAQL KMDDGEELET CLGGGIPNAP DIDWISELVR FE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07500.16e-62C3H family protein