PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR80631.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NAC
Protein Properties Length: 257aa    MW: 30280.8 Da    PI: 4.463
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR80631.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM109.92.8e-34111341128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkge 98 
                 lp GfrF Ptdeel+  yL+ k+ + +l++ +vi+++++y+++P+++  k ++++++ yfF++  kky++g+r++r + + g Wkat  dk++ +++++
  RWR80631.1  11 LPWGFRFLPTDEELL-IYLRTKILSLPLPC-NVIEDIELYNYHPSQIGGKGEEDDNKRYFFTRLVKKYENGERPSRaVKNGGHWKATTGDKTIRDSRNN 107
                 689************.9*************.99**************9788888999*******************5556899**************** PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                 + g kk+Lvf   +a + +kt+W+m+eyr+
  RWR80631.1 108 KLGFKKSLVFI--DALE-KKTNWLMQEYRI 134
                 ***********..4444.68********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MMMTPSAAMM LPWGFRFLPT DEELLIYLRT KILSLPLPCN VIEDIELYNY HPSQIGGKGE  60
EDDNKRYFFT RLVKKYENGE RPSRAVKNGG HWKATTGDKT IRDSRNNKLG FKKSLVFIDA  120
LEKKTNWLMQ EYRIDEHRKN NGSGSTSTKK DQWVLCCIYE KINAKEKKQR KEKKELENNQ  180
HDDQEKDDVV FEEEEEMPPS DDEFFEGLSE KEELQNDQDD DQEKGDVVFE EEQLPYFDDE  240
FFEGLPATAT WLDFPFT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.11e-36NAC family protein