PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR80647.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family C2H2
Protein Properties Length: 430aa    MW: 47085.4 Da    PI: 6.5921
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR80647.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.50.000937996219
                EETTTTEEESSHHHHHHH CS
     zf-C2H2  2 kCpdCgksFsrksnLkrH 19
                +C++Cg+ Fs++ ++  H
  RWR80647.1 79 SCENCGQEFSSWKSFFEH 96
                6**************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    
MDQQQSFKHF CRICKKGFMC GRALGGHMRA HGIGDETGHF DDDDSANDWI DNLGGKASAG  60
NKRMYALRAN PNRLKGCRSC ENCGQEFSSW KSFFEHGKCS SSDDGELVVS SPEEDIDGVG  120
WGGCGGWSKR KRTRRVPSSE EEEEEDLANC LVMLSTARVD PPAVDTDESS ATAGKEEEER  180
REFMTTIADK AKGVRKGLFE CKACKKVFNS HQALGGHRAS HKKVKGCFAS KPDNLDESIV  240
EEEVITHEDL SIPSKISHVP QMDFHVSINP TKTKSKVHEC SICHRTFASG QALGGHKRCH  300
WVTSSSSAQQ LLQRPKSNQL EALDLNLPAP VEDPSGVRQD NLGSLHLQLP TAICIQQWIG  360
MHTNANNNDT QKKINSNNNI SSSSLHLDDE ADSRIKIAKL SDLKDINLGG DSSPWLQVGI  420
GSSANGTNDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35280.12e-30C2H2 family protein