PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR80925.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TALE

Protein Properties

Length: 295aa MW: 33880.5 Da PI: 6.6985

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR80925.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.6	1.8e-07	244	277	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + RWR80925.1 244 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 277 469*****************************87 PP
2	ELK	22.5	2.7e-08	198	219	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++ + ++++E++ RWR80925.1 198 ELKVELKQGFKSTIEDVREEIM 219 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MQQQEHQLGM EIGVVGMMGG SMLTQLEEDQ QQQLKSEIAS HPLCHQLLAA HVGCLRVATP 60 IDHLPLIEAQ LAQMHHILRP YQSHQHHQFL PPHEKQDLDN FLAQYLLLLS SFKERLQQHV 120 QVHAVEAVMG CRDIEQSFHA LTGLTLGEGT GATMSDDEDD MQMEYAFDGT TNGHDLMGFG 180 PLLPTEAERS LMDRVRQELK VELKQGFKST IEDVREEIMR KRRAGKLPGD TTSVLKNWWQ 240 QHAKWPYPTE DDKAKLVEET GLQLKQINNW FINQRKRNWH NHSQPAAALK SKRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	275	295	RKRNWHNHSQPAAALKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-125	TALE family protein