PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR80932.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

bHLH

Protein Properties

Length: 248aa MW: 27695.7 Da PI: 8.93

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR80932.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.3	3.1e-09	79	144	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...............TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkas............kapskKlsKaeiLekAveYIksLq 55 + h +Er RR+++ + + L++ lP ++ +K s ++ +A +YIk+Lq RWR80932.1 79 KIIHRDVERLRRQEMSTLYMLLKSKLPRDFlkakeschllssLSFTGKRSISDHMNEAANYIKHLQ 144 56699*********************999*******999******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MNYIAPTWYF NQGNELCFQT SIPHHTTIIH DVVPVHPPIT REPPTVEPKR PALGAGAGAA 60 APTVNDADDV ENRGNKKRKI IHRDVERLRR QEMSTLYMLL KSKLPRDFLK AKESCHLLSS 120 LSFTGKRSIS DHMNEAANYI KHLQKKIQEL EEKRDLLRRV TLSSSNSKSS THCEGSSSSP 180 QVIVRNTFAG AAVAVVGQLG QEVPLSRVIK ALVEEGLNVI MSVSTCISAQ WVYSLECEVH 240 IYPSTSYY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	76	103	KKRKIIHRDVERLRRQEMSTLYMLLKSK
2	77	90	KRKIIHRDVERLRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51780.1	1e-22	bHLH family protein