PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR80946.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 178aa    MW: 20016.7 Da    PI: 10.3286
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR80946.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2667.3e-213181256
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                +++GVr ++ +gr++AeIrd ++    ++r +lg+f+taeeAa+a+++a+++l+g+
  RWR80946.1 31 HFRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTFDTAEEAARAYDEAARNLRGP 81
                69*******.**********883....5*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MAVEMLQLRK EGFPTGEKEP VTVAAPVKEA HFRGVRKRPW GRFAAEIRDP WKKTRKWLGT  60
FDTAEEAARA YDEAARNLRG PKAKTNFSCD GEISVSAAAA APGGFQNHLQ QQQWRSPPPY  120
GVGSDARDLF PRGRPADFSA YRQLDAAVRG EPEMKKMKKE EEKKKPFAFD LNQPAPLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.13e-26ERF family protein