PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR81078.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

GRF

Protein Properties

Length: 339aa MW: 37680.9 Da PI: 8.8473

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR81078.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79	4.5e-25	69	113	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+ RWR81078.1 69 DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVET 113 79****************************************997 PP
2	QLQ	64.2	3.2e-22	8	43	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTa+Q+q+L++Q+l++Ky++a+ PvPp+Ll +i+k RWR81078.1 8 PFTASQWQELEHQALIFKYMMAGIPVPPDLLIPIRK 43 9*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MNSAARPPFT ASQWQELEHQ ALIFKYMMAG IPVPPDLLIP IRKSFESMTA RFYHHPAMGY 60 CSFYGKKPDP EPGRCRRTDG KKWRCSKDAY PDSKYCERHM HRGRNRSRKP VETQTISQST 120 STGTSLNPAT ASSAGGGGSG FQSLVPLHSI SNPQGPSSGN NPQLQIEHGP YGIANKEFRY 180 LHGVKGDVDE RSLFSEASGS ARGVGMEFPL DNTWRLMPPS LSSFPPSKPR NGSILQSNYT 240 QLQSLQDLDT VTIASALPKQ QHQQHSFFGS EFGSSEPVKQ ESQSLRPFFD EWPKARDSWT 300 DLEEERANRN SFSTTQLSIS IPMASSDFPT ASSRSPNND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	5e-50	GRF family protein