PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR81081.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 158aa MW: 18149.8 Da PI: 10.3349

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR81081.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.1	9.8e-19	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd +l+++vk +G + W++ ++ g++R++k+c++rw +yl RWR81081.1 17 RGAWTAEEDRKLAEYVKIHGDKKWRSLPANAGLNRCGKSCRLRWMNYL 64 89********************************************97 PP
2	Myb_DNA-binding	52.4	1.2e-16	70	115	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E++l+++++++ G++ W++Ia +++ gRt++++k++w+++l RWR81081.1 70 RGNISEDEEDLIIRLHNLIGNR-WSLIAGRLP-GRTDNEIKNHWNTHL 115 7899****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 158 aa Download sequence
MVKKTESNFL PKKKVIRGAW TAEEDRKLAE YVKIHGDKKW RSLPANAGLN RCGKSCRLRW 60 MNYLRPGIKR GNISEDEEDL IIRLHNLIGN RWSLIAGRLP GRTDNEIKNH WNTHLSKKSL 120 TMNELNLKLN HKVETNVDCS SPSSSAISAP DMNWAYPD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	4e-55	MYB family protein