PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR81125.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family HB-other
Protein Properties Length: 351aa    MW: 39154 Da    PI: 6.5141
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR81125.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.45.9e-091375656
                S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHHH CS
    Homeobox  6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNrRakek 56
                +ft++++ e+e++ ++  n  p++e ++ LA+k            ++ +qV +WFqNrR+ ++
  RWR81125.1 13 RFTPSEVAEMEACLREsnNAVPTREIIASLADKFsasaeragkiVVQPKQVWNWFQNRRYAQR 75
                69*************666999*********************999**************9887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MGRPPHSGGP AFRFTPSEVA EMEACLRESN NAVPTREIIA SLADKFSASA ERAGKIVVQP  60
KQVWNWFQNR RYAQRAKLVK TPGKSAIPTS TPDDSVPVRN VPIPAPIPSD KNSVIENTQM  120
EFEAKSARDG AWYDVATFIS HRMFETGDPE VRVRFAGFGT EEDEWVNVRR SLRQRSLPCE  180
AAECVAVIPG DLVLCFQEGK EQALYFDAHI LDAQRRRHDV RGCRCRFLVR YDHDQSEEIV  240
PLRKICRRPE TDHRLQQLQT LKDHTSLSQV NVMKEPSSAG PSRDINAATQ KTEELVTTPS  300
VQANEPQSVE TTPSMTVEKN DAAATDVHGG NAALTVNVTV DKECFQPFGL N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18380.11e-119HB-other family protein