PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR81238.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

ERF

Protein Properties

Length: 441aa MW: 48011.6 Da PI: 4.2761

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR81238.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	59.7	7.1e-19	34	82	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 + GVr+++ +grWvAeI+d ++ r +lg+f+taeeAa+a+++a+++l+g RWR81238.1 34 FLGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEEAARAYDEAARALRG 82 67****.7*****....4456***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MVEPNQPPPA TKKTQRPNQP PPAKKKTQRA ERRFLGVRQR PSGRWVAEIK DSLQKVRLWL 60 GTFDTAEEAA RAYDEAARAL RGSNARTNFE LTDAAGAGSD DVPESAAPFS FEDGCDATGG 120 LLGALKAKLL DGKAVRFWGT GPIASSSVII RPSLQRGRCP VSLNPKEGPL HELDKTGTAE 180 HSSVGSNDQP PSSNSSQIAS DVCPTMATVT CNNEDSWLVS TSLNPFSPAE FSFSDRCLEM 240 GASPEFQPPA QSCGGMGGLW STEDCVGEGE NGWGVSSGPC DPLVDVASML SEMQEGYQRL 300 GPIPWTDDAS CFPFYWGIFE IVISCHCDCL DNQLQAICHV RICQLFYNLD AALLDFVGYR 360 TCLDPTGWCY CCVKGNMAAE LNMGILLDIV DDEWMRDTLP RDDVSVPPEM ATRTDDVEDT 420 NQESQPVEGD AWRDLALDTH Q

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MVEPNQPPPA TKKTQRPNQP PPAKKKTQRA ERRFLGVRQR PSGRWVAEIK DSLQKVRLWL  60
GTFDTAEEAA RAYDEAARAL RGSNARTNFE LTDAAGAGSD DVPESAAPFS FEDGCDATGG  120
LLGALKAKLL DGKAVRFWGT GPIASSSVII RPSLQRGRCP VSLNPKEGPL HELDKTGTAE  180
HSSVGSNDQP PSSNSSQIAS DVCPTMATVT CNNEDSWLVS TSLNPFSPAE FSFSDRCLEM  240
GASPEFQPPA QSCGGMGGLW STEDCVGEGE NGWGVSSGPC DPLVDVASML SEMQEGYQRL  300
GPIPWTDDAS CFPFYWGIFE IVISCHCDCL DNQLQAICHV RICQLFYNLD AALLDFVGYR  360
TCLDPTGWCY CCVKGNMAAE LNMGILLDIV DDEWMRDTLP RDDVSVPPEM ATRTDDVEDT  420
NQESQPVEGD AWRDLALDTH Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G19790.1	4e-17	ERF family protein