PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR81307.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

LBD

Protein Properties

Length: 151aa MW: 16784.3 Da PI: 6.4834

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR81307.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	139.1	1.5e-43	6	105	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +Ca+Ck+lrr+C++dC++ap fp +p+kfa+vhk+FGasnv+k+l++lp ++r+da+sslvyeA+ar+rdPvyG+vg i+ lq+q++qlk +la++k+ RWR81307.1 6 PCASCKLLRRRCSQDCIFAPFFPPGDPQKFAIVHKVFGASNVSKMLQELPIHQRPDAVSSLVYEANARVRDPVYGCVGAISYLQNQVSQLKMQLAVAKA 104 7**********************************************************************************************9998 PP DUF260 100 e 100 e RWR81307.1 105 E 105 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 151 aa Download sequence
MGGNTPCASC KLLRRRCSQD CIFAPFFPPG DPQKFAIVHK VFGASNVSKM LQELPIHQRP 60 DAVSSLVYEA NARVRDPVYG CVGAISYLQN QVSQLKMQLA VAKAEILCIQ MQQEPPFSVL 120 QQDPDDISQF MDFTSSSNVI QESLKSESLW T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30130.1	2e-73	LBD family protein