PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR81530.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 258aa MW: 29743.4 Da PI: 7.2505

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR81530.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.6	1.3e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ l+ +++++G g+W++ ++ g+ R++k+c++rw +yl RWR81530.1 14 KGPWTPEEDQVLIAYIQRYGHGNWRALPKQAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	53.7	4.7e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE+e +++++++lG++ W++Ia++++ gRt++++k+ w+++l RWR81530.1 67 RGNFTREEEETIIKLHELLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MVRAPCCEKM GLKKGPWTPE EDQVLIAYIQ RYGHGNWRAL PKQAGLLRCG KSCRLRWTNY 60 LRPDIKRGNF TREEEETIIK LHELLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLHQNP 120 TTASRPAVGP DCAAYLQQTH RHPHLELPAK QQQQQQQLEK FLLENPLSPP QRQSSSDLSS 180 PSSPSSSPSN HTIFSIKDDE SLKEFNGYYW SDAPSMEDPS TCQEDFNYSQ RQPIQLVDNE 240 SMDFWLNLLV ETDTLPDI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	8e-75	MYB family protein