PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR81540.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family WOX
Protein Properties Length: 167aa    MW: 19308.8 Da    PI: 8.4957
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR81540.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.99.8e-202179457
                -SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  4 RttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                R+++t+eq+++L +lF++  r+p++++++ ++++l    +++ ++V++WFqN++a+e++
  RWR81540.1 21 RWNPTAEQVKVLTDLFRSgLRTPTTDQIQNISSHLsfygQIESKNVFYWFQNHKARERQ 79
                *****************99**************************************97 PP
2Wus_type_Homeobox112.81.8e-362081465
  Wus_type_Homeobox  4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                        RW+Pt+eQ+k+L++l++sGlrtP++++iq+i+++L+ yG+ie+kNVfyWFQN+kaRerqk+
         RWR81540.1 20 GRWNPTAEQVKVLTDLFRSGLRTPTTDQIQNISSHLSFYGQIESKNVFYWFQNHKARERQKR 81
                       6***********************************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MDERMPGVGL KGVGGKCGGG RWNPTAEQVK VLTDLFRSGL RTPTTDQIQN ISSHLSFYGQ  60
IESKNVFYWF QNHKARERQK RRRISHSVHH VDRDHHLALV KHGGEADLQV MEQERAIETL  120
QLFPLNTYEE ESQVDKFRYR RGEWKEITFL PATGEDPPPL DLRLSSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11420GGKCGGG
28084KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11260.19e-48WOX family protein