PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR81576.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TALE

Protein Properties

Length: 623aa MW: 68554.6 Da PI: 6.8764

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR81576.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	31.6	2.8e-10	425	462	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ ++++ LAk++gL+ +qV++WF N R + RWR81576.1 425 FEHflHPYPTDADKQMLAKQTGLSRNQVSNWFINARVR 462 554459******************************88 PP
2	BELL	100.2	1.6e-32	292	361	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e ++ ka+L+s+l+e++krYkqy++qlq v+ sFe vagl +a+pYtslA ka+S+hFrcLk+ai++q+ RWR81576.1 292 GERRRMKARLISMLHEMYKRYKQYCQQLQDVVTSFESVAGLSTAAPYTSLAIKAMSKHFRCLKNAITDQL 361 567788*************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 623 aa Download sequence
MSEGFELEPF HVPQQSRRDK LRERETAATS IQGGCAGLLP LYDPSLLSSA MLTCASTDMH 60 HHHHNQTPPF IKEEGMNFMG FVGAGAGFLP SSASSAPSSS QLLLDLTQSS VVVSANPNYN 120 QEDINIGNAS NPFFYSSQIP QNVRDFDPSF VENGGVAFKT HPLSYAPQDA SSTGQGLSLS 180 LSSHYRNRPD SASGAGVFEG KGVGNYVVRG IPAGDSMPRS SVPIGPFTGY TAILKGSRFL 240 RPAQQLLEEI CDVGRGFYVD RSGGESSSSR DMESLSESGL VDEGHIGESD QGERRRMKAR 300 LISMLHEMYK RYKQYCQQLQ DVVTSFESVA GLSTAAPYTS LAIKAMSKHF RCLKNAITDQ 360 LRFTSRVLAE ESSGKDENQS FGLVDHGVRQ QKAAHNLSIH DQPHIWRPQR GLPERAVAVL 420 RAWLFEHFLH PYPTDADKQM LAKQTGLSRN QVSNWFINAR VRLWKPMVEE IHTLEMRQSQ 480 RVSEGSNNNA KEQCELPAVP VLPMDKQPEN STTQKNQDPP PKRYRNELAN LPNNCAESMN 540 FSYDNVAGHH HGGISLARGN GGISLTLGLH QNNSSGLSEP LPVTVGHFGL MDNSNPYVMA 600 DFESQNRHLG RDIGGQLLRD FVG

Sequence ? help Back to Top

Protein Sequence Length: 623 aa Download sequence

MSEGFELEPF HVPQQSRRDK LRERETAATS IQGGCAGLLP LYDPSLLSSA MLTCASTDMH  60
HHHHNQTPPF IKEEGMNFMG FVGAGAGFLP SSASSAPSSS QLLLDLTQSS VVVSANPNYN  120
QEDINIGNAS NPFFYSSQIP QNVRDFDPSF VENGGVAFKT HPLSYAPQDA SSTGQGLSLS  180
LSSHYRNRPD SASGAGVFEG KGVGNYVVRG IPAGDSMPRS SVPIGPFTGY TAILKGSRFL  240
RPAQQLLEEI CDVGRGFYVD RSGGESSSSR DMESLSESGL VDEGHIGESD QGERRRMKAR  300
LISMLHEMYK RYKQYCQQLQ DVVTSFESVA GLSTAAPYTS LAIKAMSKHF RCLKNAITDQ  360
LRFTSRVLAE ESSGKDENQS FGLVDHGVRQ QKAAHNLSIH DQPHIWRPQR GLPERAVAVL  420
RAWLFEHFLH PYPTDADKQM LAKQTGLSRN QVSNWFINAR VRLWKPMVEE IHTLEMRQSQ  480
RVSEGSNNNA KEQCELPAVP VLPMDKQPEN STTQKNQDPP PKRYRNELAN LPNNCAESMN  540
FSYDNVAGHH HGGISLARGN GGISLTLGLH QNNSSGLSEP LPVTVGHFGL MDNSNPYVMA  600
DFESQNRHLG RDIGGQLLRD FVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	1e-100	TALE family protein