PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR81632.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WOX

Protein Properties

Length: 213aa MW: 23919.9 Da PI: 6.2682

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR81632.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.4	8.1e-21	8	67	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++tkeq+ +Le+l+++ ++ps+ee++++A++l +++ ++V++WFqNr+a+ ++ RWR81632.1 8 SRWSPTKEQISALEDLYREgLQTPSTEEIQQIASNLraygHIEGKNVFYWFQNRKARLRQ 67 6***************99***********************************996 PP
2	Wus_type_Homeobox	106	2.3e-34	7	69	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +RW+Pt+eQi Le+ly++Gl+tP++eeiq+i+++L++yG+ie+kNVfyWFQNrkaR rq+q RWR81632.1 7 ISRWSPTKEQISALEDLYREGLQTPSTEEIQQIASNLRAYGHIEGKNVFYWFQNRKARLRQRQ 69 58***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence
MQMASSISRW SPTKEQISAL EDLYREGLQT PSTEEIQQIA SNLRAYGHIE GKNVFYWFQN 60 RKARLRQRQR QEPRLYMSRL VRNRPKVPIL PASTTNNTTC PDVLGNALCF SQSAIGFYTQ 120 LPAALFPEGV SEIPKISQRT VGLPFPYEYL DPIDGVSDAN QHGQANDTNK LQTLELFPLH 180 PTGILGEWSE MSSPSSVITS SPLSSETTIQ DFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59340.1	6e-29	WOX family protein