PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR81766.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

LBD

Protein Properties

Length: 195aa MW: 21158.3 Da PI: 7.3624

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR81766.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	133.9	6.3e-42	36	135	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaC+vlrrkC+++Cvlapyfp +p kf +hk+FGasn++kll++lpe +r da+ss+vyeA+ar+rdPvyG++g i +lq+q++ql+++la++k+ RWR81766.1 36 PCAACRVLRRKCTDKCVLAPYFPPMDPLKFTSAHKVFGASNISKLLQELPECHRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSQLQTQLAKAKA 134 7***********************************************************************************************998 PP DUF260 100 e 100 e RWR81766.1 135 E 135 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
MEINNTTATA AYPAYPSPPA SSISTLAFPP VVVASPCAAC RVLRRKCTDK CVLAPYFPPM 60 DPLKFTSAHK VFGASNISKL LQELPECHRA DAVSSMVYEA NARIRDPVYG CAGAICQLQK 120 QVSQLQTQLA KAKAELLNMQ TQRANLVAIV CMETAHSQAQ ILQDSSANPH MIHPNNDGFI 180 DDSSNLGSVW EPLWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	1e-61	LBD family protein