PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR81837.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NF-YA
Protein Properties Length: 203aa    MW: 22533.9 Da    PI: 7.9329
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR81837.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA108.36.1e-34109165158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 +ep+YVNaKQy++Il+RRq+Rak+e e+kl +ksrkpylheSRh hAl+RpRg+gGrF
  RWR81837.1 109 EEPVYVNAKQYHGILRRRQSRAKAELENKL-IKSRKPYLHESRHLHALKRPRGCGGRF 165
                 69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MTSSVHDLSS EPDNGGSREQ QKQTQNLQPQ IQNQPPTTGL VHPGTASASA EYMMPHPQLD  60
VGHTMAQTPY AYHDPYYGGI LAAYGAQTMI HPHFGIQPTG VPLPSDAIEE PVYVNAKQYH  120
GILRRRQSRA KAELENKLIK SRKPYLHESR HLHALKRPRG CGGRFVNSKG DQNQNEVSTH  180
DKSQQPDHDP DRNDSSEKAS LSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.29e-49NF-YA family protein