PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR81924.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family Trihelix
Protein Properties Length: 315aa    MW: 35509.9 Da    PI: 9.3632
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR81924.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix56.76.3e-1827117285
    trihelix   2 WtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                 Wt +e l+Li+a++ +eer  +++           + +W++v +++++ g+ rs++qC++kw+nl ++ykk++++ekk ++++  + + + +l
  RWR81924.1  27 WTLHEALVLITAKKLDEERRMKKEsggegrggrPTELRWKWVEDYCWKNGCMRSQNQCNDKWDNLMRDYKKVRDHEKKVEDGR--EQSSYWKL 117
                 **************777776654334455555599******************************************974333..34455555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MADQSNAVMV LGVAEGETMR EYRKGNWTLH EALVLITAKK LDEERRMKKE SGGEGRGGRP  60
TELRWKWVED YCWKNGCMRS QNQCNDKWDN LMRDYKKVRD HEKKVEDGRE QSSYWKLERH  120
ERKDKNLPTN LLPQIHEALV EVVERRGTQR ARVYVPTPNS VEVGLVGEKP ISSSMPPSLP  180
LSQHHSSLPT PPQPPSPHAQ ALATLDSDGS EHSNSSAKRR RKRGEGSSST GADHELSSAI  240
SKSASILSEA LLACEEKEER RHRELINVEE RKLKIEESKT DISRQAINGL TAAVNKLATS  300
ILALASERRN PSAPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31310.18e-45Trihelix family protein