PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR81997.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NF-YB
Protein Properties Length: 133aa    MW: 15165.2 Da    PI: 4.4361
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR81997.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB66.16.7e-212731485
       NF-YB 14 srimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkv 85
                 +i+k++lP + ++++da++++ ec +efi +++se+++ c re+++ti+++ +l al  lGf +y+e++ +
  RWR81997.1  2 CKIIKEMLPPDVRVARDAQDLLVECCVEFINLISSESNEVCSREEKRTIAPEHVLKALEVLGFGEYIEEVYA 73
                689*****************************************************************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
MCKIIKEMLP PDVRVARDAQ DLLVECCVEF INLISSESNE VCSREEKRTI APEHVLKALE  60
VLGFGEYIEE VYAAYEQHKL ETLDSPRGGK WSGVEMTEEE ALVEQQRMFA EARARMNGAN  120
IPKQSDSDRS MDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.42e-72NF-YB family protein