PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR82001.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 177aa    MW: 19713.8 Da    PI: 10.1049
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR82001.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.81.4e-111361555
                HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
         HLH  5 hnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                 + +Er+RR ++++  ++L +l P+    +sk+ +s  + Le+A  YI++Lq
  RWR82001.1 13 RKTVERNRRMNMKDLCSKLASLTPSH---RSKRaPSVLDQLEQAAAYIRELQ 61
                5789*********************9...89999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MKSSKSSLSK IERKTVERNR RMNMKDLCSK LASLTPSHRS KRAPSVLDQL EQAAAYIREL  60
QENIKALKEK RALAAYIVGI NKDITDGMTV ELRTPVIELR ESGSAVEVVL ITGLNKNFML  120
SDVISIIEEE GAQVVNVNLS CAANKVFHTI HSQVTSARVG FESVRVYERL KELVKGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.19e-30bHLH family protein